Notice Information
Notice Title
CAPITAL PURCHASE OF Next Generation Sequencer (NGS)
Notice Description
HSE are looking to procure a Next Generation Sequencing (NGS) system for routine bacterial and fungal identification purposes that will require the partial sequencing of targeted genes, rather than the whole genome work. The system must be capable of identifying microorganisms to species level either from purified colonies (culture) or from mixed populations of microorganisms without the need for culture; the latter based on direct DNA extraction and target gene amplification from mainly environmental samples (e.g. soil, water, air). Based on current and expected future identification requirements, HSE expect that most if not all bacterial work will focus on the 16S rRNA gene (16S rDNA sequencing). Any fungal work would likely focus on the internal transcribed Spacer regions (ITS) or 18S rRNA gene sequencing. HSE is not a diagnostic laboratory and we do not envisage very high output requirements and are therefore interested in accuracy and cost effectiveness over throughput. HSE require a machine that can provide species level identification for fungi and bacteria, including those derived from environmental isolates. Based on the above requirement, HSE expect that the NGS system will be able to offer between a 500bp to 600bp read (i.e. between a 2 x 250 bp to 2 x 300 bp read capability) from its standard application; this would, for example, enable the reliable routine sequencing of relevant hyper variable regions of the 16S gene (e.g. V3, V4). HSE Science Division's laboratory space is limited, so the machine needs to be compact and user-friendly; a bench space of 1m2 would be a reasonable guide as to what space it needs to fit in to. The system must have dedicated on-board software as part of the package to enable sequence alignment/identification; this needs to be user friendly, with a good user interface and not just designed for the specialist user. This is because our trained operators will not be using the system all of the time - sequencing will be one of several tasks they regularly undertake. At the very least, the sequencing output software needs to link to open access gene sequence databases, such as NCBI to enable instant access to integrated sequence identification, which will be performed at the end of the sequencing process. We do not want to be constrained by access that is restricted to licensed sequence datasets only, although we appreciate that this may be an option The system needs to have design considerations whereby the machine and its accessories do not require high maintenance or high levels of operator hands-on input i.e. a high degree of process automation is required for most of the sequencing process. Additional information: In order to access the tender documentation please register on the intend portal at https://in-tendhost.co.uk/hse/aspx/Home
Notice Details
Publication & Lifecycle
- Open Contracting ID
- ocds-b5fd17-23428dc7-6a8d-44f6-a089-9f4f5b1cdd3c
- Publication Source
- Contracts Finder
- Latest Notice
- https://www.contractsfinder.service.gov.uk/Notice/c745cddd-5f37-425f-8200-e9c29a4df3ac
- Current Stage
- Tender
- All Stages
- Tender
Procurement Classification
- Notice Type
- Tender Notice
- Procurement Type
- Standard
- Procurement Category
- Not specified
- Procurement Method
- Open
- Procurement Method Details
- Open procedure (below threshold)
- Tender Suitability
- SME
- Awardee Scale
- Not specified
Common Procurement Vocabulary (CPV)
- CPV Divisions
38 - Laboratory, optical and precision equipments (excl. glasses)
-
- CPV Codes
38300000 - Measuring instruments
38500000 - Checking and testing apparatus
Notice Value(s)
- Tender Value
- £1
- Lots Value
- Not specified
- Awards Value
- Not specified
- Contracts Value
- Not specified
Notice Dates
- Publication Date
- 17 Jul 20196 years ago
- Submission Deadline
- 6 Aug 2019Expired
- Future Notice Date
- Not specified
- Award Date
- Not specified
- Contract Period
- 1 Sep 2019 - 31 Oct 2019 1-6 months
- Recurrence
- Not specified
Notice Status
- Tender Status
- Active
- Lots Status
- Not Specified
- Awards Status
- Not Specified
- Contracts Status
- Not Specified
Buyer & Supplier
Contracting Authority (Buyer)
- Main Buyer
- HEALTH & SAFETY EXECUTIVE
- Contact Name
- Available with D3 Tenders Premium →
- Contact Email
- Available with D3 Tenders Premium →
- Contact Phone
- Available with D3 Tenders Premium →
Buyer Location
- Locality
- BOOTLE
- Postcode
- L20 7HS
- Post Town
- Liverpool
- Country
- England
-
- Major Region (ITL 1)
- TLD North West (England)
- Basic Region (ITL 2)
- TLD7 Merseyside
- Small Region (ITL 3)
- TLD73 Sefton
- Delivery Location
- Not specified
-
- Local Authority
- Sefton
- Electoral Ward
- Linacre
- Westminster Constituency
- Bootle
Further Information
Notice Documents
-
https://www.contractsfinder.service.gov.uk/Notice/c745cddd-5f37-425f-8200-e9c29a4df3ac
17th July 2019 - Opportunity notice on Contracts Finder
Notice URLs
Open Contracting Data Standard (OCDS)
View full OCDS Record for this contracting process
The Open Contracting Data Standard (OCDS) is a framework designed to increase transparency and access to public procurement data in the public sector. It is widely used by governments and organisations worldwide to report on procurement processes and contracts.
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